IEG Members:Dr. Liyou Wu

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[edit] LIYOU WU, PhD

Institute for Environmental Genomics

Stephenson Research & Technology Center

University of Oklahoma

101 David L. Boren Blvd.

Norman, OK 73019, USA

Phone: 405-325-8615 (O)

405-325-2537 (H)

FAX: 405-325-7871

e-mail: lwu@rccc.ou.edu

Education

  • B.S. Plant Pathology and Entomology 1981 Hunan Agricultural University
  • M.S. Plant Pathology 1987 Hunan Agricultural University
  • Ph.D. Molecular and Environmental Microbiology 2001 Hunan Agricultural University

Professional Experience

  • 2011-Present Adjunct Professor/Research Scientist, Institution for Environmental Genomics and Department of Botany and Microbiology, the University of Oklahoma
  • 2007-2011 Adjunct Associate Professor/Research Scientist, Institution for Environmental Genomics and Department of Botany and Microbiology, the University of Oklahoma
  • 2006-2007 Research Assistant Professor, Institution for Environmental Genomics and Department of Botany and Microbiology, the University of Oklahoma
  • 2002-2006 Research Staff , Environmental Sciences Division, Oak Ridge National Laboratory
  • 2001-2002 Postdoctoral Research Associate, Environmental Sciences Division, Oak Ridge National Laboratory
  • 1997-2001 Visiting Scientist, Worked on joint projects at Michigan State University Center for Microbial Ecology and Environmental Sciences Division at Oak Ridge National Laboratory
  • 1998-2001 Professor, Department of Entomology and Plant Pathology, Hunan Agricultural University, Changsha, China
  • 1993-1997 Associate Professor, Department of Entomology and Plant Pathology, Hunan Agricultural University, Changsha, China
  • 1988-1993 Lecturer, Department of Entomology and Plant Pathology, Hunan Agricultural University, Changsha, China
  • 1987-1988 Teaching Assistant, Department of Entomology and Plant Pathology, Hunan Agricultural University, Changsha, China
  • 1984-1987 Graduate Research and Teaching Assistant, Department of Entomology and Plant Pathology, Hunan Agricultural University, Changsha, China
  • 1982-1984 Research Assistant, Taojiang Agricultural Institute, Taojiang, China

Professional Societies and Academic Honors

  • 1997 Excellent Teaching Award, Hunan Education Committee
  • 1996 Excellent Scientific Book Award, Huadong Area Society of Publication Committee
  • 1994 Scientific and Technological Progress Award, Hunan Science and Technology Committee
  • 1980 1985 1986 Excellent Student Award, Hunan Agricultural University

Publications

Papers

  1. Wu, L., L. Kellogg, A. H. Devol, J. M. Tiedje, and J. Zhou. 2008. Microarray-based characterization of microbial community functional structure and heterogeneity in marine sediments from the gulf of Mexico. Applied and Environmental Microbiology 74:4516-4529.
  2. Wu, L. Y., X. D. Liu, M. W. Fields, D. K. Thompson, C. E. Bagwell, J. M. Tiedje, T. C. Hazen, and J. Z. Zhou. 2008. Microarray-based whole-genome hybridization as a tool for determining procaryotic species relatedness. ISME Journal 2:642-655.
  3. Wu, L. Y., X. Liu, C. W. Schadt, and J. Z. Zhou. 2006. Microarray-based analysis of subnanogram quantities of microbial community DNAs by using whole-community genome amplification. Applied and Environmental Microbiology 72:4931-4941.
  4. Wu, L. Y., D. K. Thompson, X. D. Liu, M. W. Fields, C. E. Bagwell, J. M. Tiedje, and J. Z. Zhou. 2004. Development and evaluation of microarray-based whole-genome hybridization for detection of microorganisms within the context of environmental applications. Environmental Science & Technology 38:6775-6782.
  5. Wu, L. -Y., D. K. Thompson, G. -S. Li, R. A. Hurt, J. M. Tiedje, and J. -Z. Zhou. 2001. Development and Evaluation of Functional Gene Arrays for Detection of Selected Genes in the Environment. Applied and Environmental Microbiology. 67 (12): 5780-5790.
  6. Wu, W. M., J. Carley, J. Luo, M. A. Ginder-Vogel, E. Cardenas, M. B. Leigh, C. C. Hwang, S. D. Kelly, C. M. Ruan, L. Y. Wu, et al.. 2007. In situ bioreduction of uranium (VI) to submicromolar levels and reoxidation by dissolved oxygen. Environmental Science & Technology 41:5716-5723.
  7. Yin, H. Q., L. H. Cao, M. Xie, Q. J. Chen, G. Z. Qiu, J. Z. Zhou, L. Y. Wu, D. Z. Wang, and X. D. Liu. 2008. Bacterial diversity based on 16S rRNA and gyrB genes at Yinshan mine, China. Systematic and Applied Microbiology 31:302-311.
  8. Yin, H. Q., G. Z. Qiu, L. Y. Wu, M. Xie, J. H. Zhou, Z. M. Dai, D. Z. Wang, L. Kellogg, L. H. Cao, and X. D. Liu. 2008. Microbial community diversity and changes associated with a mine drainage gradient at the Dexing copper mine, China. Aquatic Microbial Ecology 51:67-76.
  9. Zhang, Y. G., X. Q. Zhang, X. D. Liu, Y. Xiao, L. J. Qu, L. Y. Wu, and J. Z. Zhou. 2007. Microarray-based analysis of changes in diversity of microbial genes involved in organic carbon decomposition following land use/cover changes. Fems Microbiology Letters 266:144-151.
  10. Tiquia, S. M., L. Y. Wu (Co-first author), S. C. Chong, S. Passovets, D. Xu, Y. Xu, and J. Z. Zhou. 2004. Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples. Biotechniques 36:664-+.
  11. Brown, S. D., M. Martin, S. Deshpande, S. Seal, K. Huang, E. Alm, Y. F. Yang, L. Y. Wu, T. F. Yan, X. D. Liu, A. Arkin, K. Chourey, J. Z. Zhou, and D. K. Thompson. 2006. Cellular response of Shewanella oneidensis to strontium stress. Applied and Environmental Microbiology 72:890-900.
  12. Leaphart, A. B., D. K. Thompson, K. Huang, E. Alm, X. F. Wan, A. Arkin, S. D. Brown, L. Y. Wu, T. F. Yan, X. D. Liu, G. S. Wickham, and J. Z. Zhou. 2006. Transcriptome profiling of Shewanella oneidensis gene expression following exposure to acidic and alkaline pH. Journal of Bacteriology 188:1633-1642.
  13. Qiu, X. Y., M. J. Daly, A. Vasilenko, M. V. Omelchenko, E. K. Gaidamakova, L. Y. Wu, J. Z. Zhou, G. W. Sundin, and J. M. Tiedje. 2006. Transcriptome analysis applied to survival of Shewanella oneidensis MR-1 exposed to ionizing radiation. Journal of Bacteriology 188:1199-1204.
  14. Wei, X. M., T. F. Yan, N. G. Hommes, X. D. Liu, L. Y. Wu, C. McAlvin, M. G. Klotz, L. A. Sayavedra-Soto, J. Z. Zhou, and D. J. Arp. 2006. Transcript profiles of Nitrosomonas europaea during growth and upon deprivation of ammonia and carbonate. Fems Microbiology Letters 257:76-83.
  15. Oda, Y., S. K. Samanta, F. E. Rey, L. Y. Wu, X. D. Liu, T. F. Yan, J. Z. Zhou, and C. S. Harwood. 2005. Functional genomic analysis of three nitrogenase isozymes in the photosynthetic bacterium Rhodopseudomonas palustris. Journal of Bacteriology 187:7784-7794.
  16. Bencheikh-Latmani, R., S. M. Williams, L. Haucke, C. S. Criddle, L. Y. Wu, J. Z. Zhou, and B. M. Tebo. 2005. Global transcriptional profiling of Shewanella oneidensis MR-1 during Cr(VI) and U(VI) reduction. Applied and Environmental Microbiology 71:7453-7460.
  17. Zhili He, Liyou Wu, Xingyuan Li, Matthew W. Fields and Jizhong Zhou. 2005. Empirical establishment of oligonucleotide probe design criteria 1 Applied and Environmental Microbiology, 71(7):3753-3760.
  18. Zhili He, Liyou Wu, Matthew W. Fields and Jizhong Zhou. 2005. Use of Microarrays with Different Probe Sizes for Monitoring Gene Expression. Applied and Environmental Microbiology, 71(9): 5154-5162.
  19. Xiaoyun Qiu, George W. Sundin, Liyou Wu, Jizhong Zhou, and James M. Tiedje. 2005. Comparative Analysis of Differentially Expressed Genes in Shewanella oneidensis MR-1 following Exposure to UVC, UVB, and UVA Radiation. Journal of Bacteriology 187:3556-3564.
  20. Liu, Y. Q., W. M. Gao, Y. Wang, L. Y. Wu, X. D. Liu, T. F. Yan, E. Alm, A. Arkin, D. K. Thompson, M. W. Fields, and J. Z. Zhou. 2005. Transcriptome analysis of Shewanella oneidensis MR-1 in response to elevated salt conditions. Journal of Bacteriology 187:2501-2507.
  21. Zhou, X. C., L. Y. Wu, and J. Z. Zhou. 2004. Fabrication of DNA microarrays on nanoengineered polymeric ultrathin film prepared by self-assembly of polyelectrolyte multilayers. Langmuir 20:8877-8885.
  22. Wan, X. F., N. C. VerBerkmoes, L. A. McCue, D. Stanek, H. Connelly, L. J. Hauser, L. Y. Wu, X. D. Liu, T. F. Yan, A. Leaphart, R. L. Hettich, J. Z. Zhou, and D. K. Thompson. 2004. Transcriptomic and proteomic characterization of the fur modulon in the metal-reducing bacterium Shewanella oneidensis. Journal of Bacteriology 186:8385-8400.
  23. Rhee, S. K., X. D. Liu, L. Y. Wu, S. C. Chong, X. F. Wan, and J. Z. Zhou. 2004. Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays. Applied and Environmental Microbiology 70:4303-4317.
  24. Liu X. –D., C. E. Bagwell, L. –Y. Wu, A. H. Devol, K. Luo, J. M. Tiedje, and J. –Z. Zhou. 2003. Molecular Diversity of Sulfate-Reducing Bacteria along Two Different Continental Margin Habitats. Applied and Environmental Microbiology 69(10): 6073-6081.
  25. Liu X. –D., S. M. Tiquia, G. Holguin, L. –Y. Wu, S. C. Nold, A. H. Devol, K. Luo, A. V. Palumbo, J. M. Tiedje, and J. –Z. Zhou. 2003. Molecular diversity of denitrifying genes in continental margin sediments within the oxygen deficient zone of the Pacific Coast of Mexico. Applied and Environmental Microbiology 69(6): 3549-3560.
  26. Liu, Y. Q., J. Z. Zhou, M. V. Omelchenko, A. S. Beliaev, A. Venkateswaran, J. Stair, L. Y. Wu, D. K. Thompson, D. Xu, I. B. Rogozin, E. K. Gaidamakova, M. Zhai, K. S. Makarova, E. V. Koonin, and M. J. Daly. 2003. Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation. Proceedings of the National Academy of Sciences of the United States of America 100:4191-4196.
  27. Yan, T. F., M. W. Fields, L. -Y. Wu, Y. G. Zu, J. M. Tiedje, and J. Z. Zhou. 2003. Molecular diversity and characterization of nitrite reductase gene fragments (nirK and nirS) from nitrate- and uranium- contaminated groundwater. Environmental Microbiology 5:13-24.
  28. Xu, D., G.- S. Li, L. -Y. Wu, J. -Z. Zhou, and Y. Xu. 2002. PRIMEGENS: robust and efficient design of gene-specific probes for microarray analysis. Bioinformatics 18:1432-1437.
  29. Gu, B.-H., D. B. Watson, L. -Y. Wu, D. H. Phillips, D. C. White, and J. Z. Zhou. 2002. Microbiological characteristics in a zero-valent iron reactive barrier. Environmental Monitoring and Assessment 77:293-309.
  30. Zhou, J. -Z., B. -Z. Xia, David S. Treves, L. -Y. Wu, T. L. Marsh, R. V. O’Neill, A. V. Palumbo, and J. M. Tiedje. 2002. Spatial and Resource Factors Influencing High Microbial Diversity in Soil. Applied and Environmental Microbiology. 68 (1): 326-334.
  31. Alex, B. S., Dorothea K. Thompson, M. Field, L.-Y. Wu, Douglas P. Lies, K. H. Nealson, J. -Z. Zhou. 2001. Microarray Expression Profiling in Shewanella oneidensis MR-1 Indicates Involvement of etrA in Global Gene Regulation. (Submitted to Journal of Bacteriology).
  32. Hurt, A. Richard, X. -Y Qiu, L. -Y Wu, Y. Roh, A. V. Palumbo, J. M. Tiedje, and J. -Z. Zhou. 2001. Simultaneous Recovery of RNA and DNA from Soil and Sediments. Applied and Environmental Microbiology. 67 (10): 4495-4503.
  33. Qiu, X. -Y, L.-Y Wu, H. -S. Huang, P. E. McDonel, A. V. Palumbo, J. M. Tiedje and J. -Z. Zhou. 2001. Evaluation of PCR-Generated Chimeras, Mutations, and Heteroduplexes with 16S rRNA Gene-Based Cloning. Applied and Environmental Microbiology. 67 (2): 880-887.
  34. Zhou, J. -Z., A. Beliaev, D.K. Thompson, A. Murray, G. Li, L.-Y. Wu, J. Heidelberg, C. Fraiser, D. Lies, K.H. Nealson, and J.M. Tiedje. 2001.Genome-wide functional analysis of metal-reducing bacterium, Shewanella oneidensis MR-1. ASM and TIGR Conference on Microbial Genomes, Monterey, CA, January 28-31.
  35. Barker, G., J. -Z. Zhou, L. -Y. Wu, A. H. Devil, and J. M. Tiedje. 2000. Nitrite Reductase Genes (nirK and nirS) as Functional Markers to Investigate Diversity of Denitrifying Bacteria in Pacific Northwest Marine Sediment Communities. Applied and Environmental Microbiology. 66 (5): 2096-2104.
  36. Wu, L.-Y., Q. -M. Xiao, L.-Y. Dai. 1998. Studies on teaching reform of plant pathology Journal of Hunan Agricultural University, 24(supplement); 97-100.
  37. Yi, T. -Y., L. -Y. Wu*, X. -X. Zhu. 1998. Screening on fungicide combination for control of phtophthora. Journal of Hunan Agricultural University. 24(1): 47~51.
  38. Wu, L. -Y., B. -D. Gao, X. -L. Liao, H. Huang. 1997. The Screening for Rape Mutants Resistant to Sclerotinia sclrotiorum in Rape and Their Resistance Identification. Research of Agricultural Modernization, 18(5): 314-316
  39. Wu, L. -Y., B. -D. Gao, X. -D. Liu, and H. Huang. 1997. A study on Procedure of Screening for Rape Mutants Resistant to Sclerotinia sclerotiorum in Rape. Journal of Hunan Agricultural University, 23(6): 515-519.
  40. Xiao, Q. -M., L. -Y. Wu, X. -D. Liu. 1996. Establishment of Virus-free Citrus Propagation System in Hunan, China. Proceedings of the 13th conference of the International Organization of Citrus Virologist (IOCV), 297~300.
  41. Wu, L. -Y, X. -D. Liu, and Q. -M. Xiao. 1993. Regeneration of Virus-free Citrus and Detection of Citrus Virus of Hunan Province. Journal of Hunan Agricultural University, 19(3): 240-247.
  42. Wu, L. -Y., X. -D. Liu, and Q. -M. Xiao. 1992. Improvement of Shoot-tip Grafting in Vitro for Virus-free Citrus. Journal of Hunan Agricultural University, 18(supple): 161-166.
  43. Wu, L. -Y., and Z. Chen. 1990. Bioinduction of Rice Resistance to Bacterial Blight and the Role of Rice Lectins in Induced Resistance. Journal of Hunan Agricultural University, 16(4): 372-379.
  44. Wu, L. -Y., X. -D. Liu, and K. -J. He. 1997. Epidemics and Forecasting of Plant Disease. Hunan Science and Technology Press.
  45. Wu, L. -Y., X. -D. Liu, and Q. -M. Xiao. 1996. Breeding Technique of Virus-free Fruit Trees. Jiangxi Science and Technology Press.
  46. Wu, L. -Y., and S. -C Xu. 1993. Pests Control for Tobacco. Hunan Science and Technology Press.
  47. Xu, S. -C, and L. -Y. Wu. 1992. Pests Control for Vegetable Crops. Hunan Science and Technology Press.

Presentations (2005, 2004, 2003)

  1. L. Y. Wu, C. W. Schadt, G. S. Wickham, S. C. Chong, A. H. Devol, J. M. Tiedje, J. Z. Zhou. 2005. Microbial Community Composition, Structure and Diversity in Marine Sediments of Gulf of Mexico Revealed by 50-mer Oligonucleotide Microarray Hybridization. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  2. L. Y. Wu, X. D. Liu, C. W. Schadt, J. M. Tiedje, J. Z. Zhou. 2005. Microarray-Based Detection of Fento-to-Nanogram Levels of Genomic DNA from Microbial Genomes and Microbial Communities using Whole Community Genome Amplification. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  3. Q. He, Z. He, L. Wu, J. D. Wall, A. P. Arkin, T. C. Hazen, D. A. Stahl, M. W. Fields, J. Zhou1. 2005. Transcriptional Gene Expression Analysis of the Response to Acetone in Desulfovibrio vulgaris Using Whole-Genome Oligonucleotide Microarrays. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  4. Z. He, L. Wu, X. Li, M. W. Fields, J. Zhou. 2005. Empirical Establishment of Oligonucleotide Probe Design Criteria. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  5. W. Gao, Y. Liu, L. Wu, T. Yan, X. Liu, J. Zhou. 2005. A Transcriptome Perspective of Shewanella oneidensis MR-1 Cells Adapted to Hypoosmotic Stress. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  6. G. S. Wickham, C. W. Schadt, T. J. Gentry, L. Wu, S. Wan, S. P. DiFazio, J. Zhou. 2005. Microbial Community Genomic Composition Associated with Elevated Levels of CO2, temperature, and Moisture as Determined by Microarray Analysis of Nitrogen Cycle Genes. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  7. G. S. Wickham, C. W. Schadt, T. J. Gentry, L. Wu, S. Wan, S. P. DiFazio, J. Zhou. 2005. Microbial Community Genomic Composition Associated with Elevated Levels of CO2, Temperature, and Moisture as Determined by Microarray Analysis of Nitrogen Cycle Genes. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  8. M. E. Clark, Z. He, Q. He, L. Wu, J. D. Wall, T. C. Hazen, J. Zhou, M. W. Fields1. 2005. Whole-Genome Expression Analysis of Desulfovibrio vulgaris Cells Throughout Exponential Phase into Stationary Phase Growth in a Defined Medium. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  9. Y. Yang, X. Wang, L. Wu, T. Yan, X. Liu, D. K. Thompson, J. Zhou. 2005. Identification and Characterization of Several Novel Genes Implicated in Metal Reduction Pathway of Shewanella oneidensis. 105th General Meeting of American Society for Microbiology, June 5-9, Atlanta GA.
  10. Beliaev, A. S., D. M. Stanek, D. K. Thompson, L. Wu, J. K. Fredrickson, J. Zhou. Analysis of Global Transcriptome Profiles of Shewanella oneidensis MR-1 in Response to Metal-Reducing Conditions. 104th General Meeting of American Society for Microbiology, May 23-27, 2004, New Orleans, Louisiana.
  11. Klappenbach, J. A., C. Cruz-García, L. Wu, J. Zhou, J. M. Tiedje. Effects of Nitrite Toxicity on the Physiology and Global Gene Expression of Shewanella oneidensis MR-1 during Aerobic Nitrate Reduction to Ammonia. 104th General Meeting of American Society for Microbiology, May 23-27, 2004, New Orleans, Louisiana.
  12. He, Z., Q. He, L. Wu, J. D. Wall, M. W. Fields, J. Zhou. Transcriptional Analysis of Desulfovibrio vulgaris Responses to NaCl Stress Using Whole-Genome Oligonucleotide Microarrays. 104th General Meeting of American Society for Microbiology, May 23-27, 2004, New Orleans, Louisiana.
  13. He, Z., Q. He, L. Wu, J. D. Wall, J. Zhou, M. W. Fields. Construction and Evaluation of Desulfovibrio vulgaris Whole-Genome Oligonucleotide Microarrays and Comparison of Cells in Exponential and Stationary Phase Growth. 104th General Meeting of American Society for Microbiology, May 23-27, 2004, New Orleans, Louisiana.
  14. He, Q., Z. He, L. Wu, J. D. Wall, T. C. Hazen, M. W. Fields, J. Zhou. Global Transcriptional Analysis of Desulfovibrio vulgaris in Response to Nitrite Stress Using Whole-Genome Oligonucleotide Microarrays. 104th General Meeting of American Society for Microbiology, May 23-27, 2004, New Orleans, Louisiana.
  15. Oda, Y., S. K. Samanta, L. Wu, X. Liu, T. Yan, J. Zhou, C. S. Harwood. Gene Expression Profiles of Rhodopseudomonas palustris Nitrogenases by Whole Genome Microarray. 104th General Meeting of American Society for Microbiology, May 23-27, 2004, New Orleans, Louisiana.
  16. Rhee S., X. Liu, L. Wu, S. Chong, X. Wan, J. Zhou. Detection of Biodegradation and Biotransformation Genes in Microbial Communities using 50-mer Oligonucleotide Microarrays. 104th General Meeting of American Society for Microbiology, May 23-27, 2004, New Orleans, Louisiana.
  17. Zhou, X., L. Wu, J. Zhou. High Sensitivity and Selectivity Label Fiee Molecular Beacon Microarray. 104th General Meeting of American Society for Microbiology, May 23-27, 2004, New Orleans, Louisiana.
  18. A. Beliaev, Y. A. Gorby, G. Pinchuk, L. Y. Wu, J. Zhou, J. K. Fredirickson. 2003. Effect of oxygen Concentrations on gene expression in Shewanella oneidensis MR-1 measured by whole-genome DNA microarrays. 103rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  19. A. V. Palumbo, Z. Yang, S. M. Sonia, L. Y. Wu, L. S. Fisher, J. Zhou, W. L. Daniels, K. Haering. 2003. Development of a mixed functional and phylogenetic microarray and its application in reclaimed mine soils. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  20. D. Stanek, A. Beliaev, L. Y. Wu, X. Liu, T. Yan, L. Fagan, J. Zhou, D. K. Thompson. 2003. Microarray expression profiling of Shewanella oneidensis MR-1 during anaerobic growth with different electron acceptors. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  21. H. Cao, D. K. Thompson, L. Y. Wu, X. Liu, T. Yan, J. Zhou. 2003. Heat shock response in Shewanella oneidensis. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  22. S. M. Sonia, L. Y. Wu, A. Devol, R. A. Hurt, Y. Liu, A. V. Palumbo, J. Zhou. 2003. Exploring functional Diversity in Puget Sound sediments using oligonucleotide Microarray. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  23. S. M. Sonia, L. Y. Wu, S. Passovets, D. Xu, Y. Xu, J. M. Tiedjie, M. W. Fields, J. Zhou. 2003. Optimization of oligonucleotide-based DNA arrays for detection of genes involved in N and S cycling from the environment. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  24. S. S. Middleton, R. Bencheikh-Latmani, J. Zhou, L. Y. Wu, C. S. Criddle. 2003. DNA microarray analysis of Cr (VI) reduction in Shewanella oneideisis MR-1 under aerobic and anaerobic conditions. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  25. T. Li, D. Stanek, L. Y. Wu, X. Liu, T. Yan, A. Beliaev, H. Cao, C. Giometti, M. Fields, D. K. Thompson J. Zhou. 2003. Whole-genome microarray-based transcription profiling of H2O2-induced stress response of Shewanella oneidensis. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  26. T. Yang X. Wei, L. Y. Wu, X. Liu, S. Rhee, D. Arp, J. M. Tiedje D. K. Thompson J. Zhou. 2003. Global gene expression profiles of Nitrosomonas europaea under starvation. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  27. W. Gao, C. Secret, C. Giometti, Y. Liu, L. Y. Wu, X. Liu, T. Yan, D. K. Thompson, M. W. Fields, D. Xu, Y. Xu, J. Zhou. 2003. DNA to Phenotype: Functional annotation of a conserved hypothetical protein in Shewanella oneidensis MR-1. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  28. X. Liu, C. E. Bagwell, L. Y. Wu, M. W. Fields, J. M. Tiedje, J. Zhou. 2003. Molecular diversity of dissimilatory sulfite reductase gene sequences (dsrAB) from groundwater contaminated with nitrate and uranium. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  29. Y. Liu, W. Gao, L. Y. Wu, X. Liu, T. Yan, M. W. Fields, D. K. Thompson, J. Zhou. 2003. Genomic expression profiling of shewanella oneidensis MR-1 exposed to salt stress. 1003rd General Meeting of American Society for Microbiology, May 18-22, Washington DC.
  30. D. M. Stanek, D. K. Thompson,A. Beliaev, M. W. Fields, L. Y. Wu, X. Wan, T. Yang, X. Liu, J. M. Tiedje, K. H. Nealson, and J. Zhou. 2003. Microarray expression profiling of Shewanella oneidensis MR-1 during anaerobic growth with different electron acceptors. 11th International Conference on Microbial Genomes. September 28-October 2, Durham, NC.
  31. H. Gao, D. K. Thompson, L. Y. Wu, T. Yang, X. Liu, T. Li and J. Zhou. 2003. Transcriptomic analysis of the response of metal-reducing Shewanella oneidensis to growth temperature differences. 11th International Conference on Microbial Genomes. September 28-October 2, Durham, NC.
  32. W. Gao, Y. Liu, L. Y. Wu, X. Liu, T. Yang, A. S. Beliaev, M. W. Fields, D. K. Thompson and J. Zhou. 2003. The conserved hypothetical protein SO1377 (gi24372955) in Shewanella oneidensis MR-1 is involved in iron homeostasis and oxidative damage protection. 11th International Conference on Microbial Genomes. September 28-October 2, Durham, NC.
  33. X. Liu, Z. He, L. Y. Wu, T. Yang, M. W. Fields, and J. Zhou. 2003. Generation and characterization of two in-frame deletion mutants of Shewanella oneidensis MR-1 genes-encoded PAS domains. 11th International Conference on Microbial Genomes. September 28-October 2, Durham, NC.
  34. X. Zhou, L. Y. Wu, D. K. Thompson and J. Zhou. 2003. High-sensitivity detection of DNA hybridization on microarray by nanoparticle encapsulated with fluorescent dye. 11th International Conference on Microbial Genomes. September 28-October 2, Durham, NC.
  35. Z. He, L. Y. Wu, TJudy D. Wall, J. Zhou, and M. W. Fields. 2003. Construction of whole-genome microarrays for Desulfovibrio vulgaris and Geobacter metallireducens and optimization of hybridization conditions for oligonucleotide microarrays. 11th International Conference on Microbial Genomes, September 28-October 2, Durham, NC.
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