IEG Members:Ye Deng

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	Curriculum Vitae
Basic information	Name: Ye Deng Title: Postdoctoral Research Assoc. Nationality: China Major field: Bioinformatics, microbiology genomics and molecular biology Current address: Institute for environmental Genomics, Stephenson Research & Technology Center 101 David L. Boren Blvd. Norman, OK 73019 Telephone: 405-325-3052(office) E-mail: dengye@ou.edu
Professional Background	Dec.2007-present: Post-doctoral Research Assoc. of University of Oklahoma Supervisor: Dr. Jizhong, Zhou Dec.2005-Dec.2007: Exchange visitor of Michigan State University, work in Oklahoma University Supervisor: Dr. Jizhong, Zhou Jan.2004-Jun.2007: Ph.D. Biochemistry and Molecular Biology, Zhejiang University, P.R.China Supervisor: Prof. Debao, Li Sept.2002-Dec.2003: M.S. Biochemistry and Molecular Biology, Zhejiang University, P.R.China Supervisor: Dr. Haitao, Dong Sept.1998-Jun.2002: B.S. Applied Chemistry, College of Chemistry and Chemical Engineering, Central South University, P.R.China
Recent Publications	Joy D. Van Nostrand, Wei-Min Wu, Liyou Wu, Ye Deng, Jack Carley, Sue Carroll, Zhili He, Baohua Gu, Jian Luo, Craig S. Criddle, David B. Watson, Philip M. Jardine, Terence L. Marsh, James M. Tiedje, Terry C. Hazen, Jizhong Zhou. GeoChip-based analysis of functional microbial communities in a bioreduced uranium-contaminated aquifer during reoxidation by oxygen. Environmental Microbiology. 2009 Fengping Wang, Huaiyang Zhou, Jun Meng, Xiaotong Peng, Lijing Jiang, Ping Sun, Chuanlun Zhang, Joy D. Van Nostrand, Ye Deng, Zhili He, Liyou Wu, Jizhong Zhou, and Xiang Xiao. GeoChip-based analysis of metabolic diversity of microbial communities at the Juan de Fuca Ridge hydrothermal vent. PNAS. 2009, 106(12): 4840 Ye Deng, Zhili He, Joy D Van Nostrand and Jizhong Zhou. Design and analysis of mismatch probes for long oligonucleotide microarrays. BMC Genomics. 2008, 9: 491 Jinjie Shanga, Xiaosong Wu, Xiuwan Lan, Yunyan Fan, Haitao Dong, Ye Deng, Donald L. Nuss and Baoshan Chen. Large-scale expressed sequence tag analysis for the chestnut blight fungus Cryphonectria parasitica. Fungal Genetics and Biology. 2008, 45(3) Haitao Dong*, Ye Deng*, Jack Chen, Sheng Wang, Sihua Peng, Cheng'en Dai, Yongqi Fang, Jing Shao, Yichun Lou and Debao Li. exploration of 3′-end processing signals and their tissue distribution in Oryza sativa. GENE. 2007, 389: 107-113 These authors contributed equally to this work Ye Deng, Haitao Dong, Qingchao Jin, Cheng’en Dai, Yongqi Fang, Shen Liang, Ke Wang, Jing Shao, Yichun Lou, Wenqin Shi, Demetrios J. Vakalounakis, Debao Li. Analysis of EST data and gene expression profiles in the conidial development of Fusarium oxysporum. Applied and Environmental Microbiology. 2006, 72: 1667-1671 Xiaoqin Guo, Haitao Dong, Kangle Zheng, Hongmei Lou, Xuelin Tan, Yongqi Fang, Yanqin Wang, Ye Deng, Chengen Dai, Yichun Lou, Jing Shao, Wenqin Shi, Dong Zhao, Debao Li. Gene Expression Profiling under Different Photoperiod/Temperature Conditions in a Photoperiod-/Thermo- Sensitive Genic Male Sterile Line of Rice (Oryza sativa L.). Chinese Science Bulletin. 2005, 50(22): 2509-2513 Haitao Dong, Wenzheng Li, Sandra Perez Alvarez, Hongmei Luo, Ye Deng, Qingchao Jin, Chen’en Dai, Daniel Cabezas Montero, Yongqi Fang, Jing Shao, Yichun Lou, Wenqin Shi, Yan Shao, Yongping Li, Jack Chen, Debao Li. Large-scale identification of ESTs from Nicotiana tabacum by normalized cDNA library sequencing. Medical Hypotheses Research. 2005, 3: 418-496 Li-Hua Wang, Ye Deng, Yong-Qi Fang, Xue-Lin Tan, De-Bao Li. Monitoring and Analyzing the Genes Specific-Expressed at Flowering Stage of Rice (Oryza sativa). Chinese Journal of Rice Science. 2004, 18(3): 192-198.
Other skills	Certified the Microsoft Certified Systems Engineer (MCSE) in 2002 Referee of basketball